One overview of every database taxify knows about

Stacks the taxonomic backbones (from list_backbones()) and the trait/status enrichments (from list_enrichments()) into a single frame with a type column, so a new user can see the full breadth in one call rather than needing to know three separate discovery verbs. The cross-source trait vocabulary is summarised in the message footer; browse it with list_traits().

Usage

taxify_databases(verbose = TRUE)

Arguments

verbose

Logical. When TRUE (default), prints a one-line count of backbones, enrichments, and registered traits.

Value

A data.frame with columns: type ("backbone" or "enrichment"), name, scope (taxonomic scope for backbones; provided trait columns for enrichments), n_rows, version, source_date (the date of the upstream data, where recorded, which can be much earlier than the release version that packaged it), installed, source.

See also

list_backbones(), list_enrichments(), list_traits().

Examples

if (FALSE) { # \dontrun{
taxify_databases()
} # }