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Add amphibian morphometrics (Huang)

Source: R/add-huang-amph.R
add_huang_amph.Rd

Joins species-level amphibian body measurements to a taxify() result by accepted_name. Only measurements comparable across Anura, Caudata and Gymnophiona are carried; per-specimen values are reduced to species medians.

Usage

add_huang_amph(x, cols = NULL, verbose = TRUE)

Arguments

x

A data.frame returned by taxify().

cols

Which columns to attach: NULL (default) the curated set, "all" every column the source carries, or a character vector of names. See enrichment_cols.

verbose

Logical. Default TRUE.

Value

The same data.frame with numeric huang_amph_svl_mm, huang_amph_head_length_mm, huang_amph_head_width_mm, huang_amph_eye_diameter_mm, huang_amph_forelimb_length_mm, huang_amph_hindlimb_length_mm and categorical huang_amph_taxon_order.

Details

Source: Huang amphibian morphological dataset (figshare, CC-BY 4.0).

References

Huang et al. A global amphibian morphological trait dataset. figshare. doi:10.6084/m9.figshare.21159229

Examples

if (FALSE) { # \dontrun{
taxify("Bufo bufo", backbone = "gbif") |>
  add_huang_amph()
} # }