Add GBIF-specific columns

Joins extra GBIF backbone columns to a taxify() result by looking up taxon_id in the GBIF backbone. Only enriches rows where backend == "gbif".

Usage

add_gbif_info(x)

Arguments

x

A data.frame returned by taxify() with backend == "gbif".

Value

The same data.frame with additional columns:

notho_type

Hybrid type: "GENERIC", "SPECIFIC", or "INFRASPECIFIC".

nom_status

Nomenclatural status (may contain multiple values).

bracket_authorship

Basionym author in parentheses.

bracket_year

Basionym author year.

gbif_year

Combining author year.

name_published_in

Publication citation.

origin

How the name entered the backbone.

infra_specific_epithet

Infraspecific epithet.

Examples

# Runs offline against the bundled example database.
old <- options(taxify.data_dir = taxify_example_data())

taxify("Quercus robur", backend = "gbif") |>
  add_gbif_info()

options(old)