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Add Mediterranean plant traits (BROT 2.0)

Source: R/add-brot.R
add_brot.Rd

Joins Mediterranean-Basin plant fire-response, regeneration and functional traits to a taxify() result by accepted_name.

Usage

add_brot(x, cols = NULL, verbose = TRUE)

Arguments

x

A data.frame returned by taxify().

cols

Which columns to attach: NULL (default) the curated set, "all" every column the source carries, or a character vector of names. See enrichment_cols.

verbose

Logical. Default TRUE.

Value

The same data.frame with brot_ columns: numeric seed_mass_mg, sla_mm2_mg, height_m, leaf_area_mm2; categorical resp_fire, growth_form, disp_mode, fruit_type, soil_seed_bank, seedling_emergence.

Details

Source: BROT 2.0 (Tavsanoglu & Pausas 2018, Scientific Data, CC-BY 4.0).

References

Tavsanoglu C, Pausas JG (2018) A functional trait database for Mediterranean Basin plants (BROT 2.0). Scientific Data 5:180135. doi:10.6084/m9.figshare.c.3843841

Examples

old <- options(taxify.data_dir = taxify_example_data())

taxify("Quercus coccifera", backbone = "gbif") |>
  add_brot()

options(old)