The Flat-File Reality
Most data analysis doesn’t happen in databases. It happens with: - CSV exports from business systems
Excel files from collaborators
Periodic data dumps with no schema
Multiple versions of “the same” file
In this world, there’s no enforced uniqueness constraint, no foreign key validation, no schema migration. The constraints exist only in your head—or in scattered comments that nobody reads.
# customer_id should be unique... I think?
# email shouldn't have NAs... right?
customers <- read.csv("customers_march_v3_FINAL.csv")When assumptions break, you discover it downstream: wrong row counts after a join, duplicated records in a report, a model that suddenly performs differently. By then, the damage is done.
Detection, Not Enforcement
keyed takes a pragmatic approach: detect problems early, don’t try to prevent them absolutely.
This differs from database thinking:
| Database Approach | keyed Approach |
|---|---|
| Reject invalid data | Accept data, warn about violations |
| Enforce constraints globally | Check at explicit boundaries |
| Transactions ensure consistency | No transactions, graceful degradation |
| Schema prevents corruption | Catches corruption after the fact |
Why not enforce constraints? Because in flat-file workflows:
Data arrives pre-corrupted — You can’t reject an export you already received
Transformations happen outside your control — Upstream systems change without notice
R’s copy semantics lose attributes — Metadata can vanish unexpectedly
Session boundaries reset state — No persistent enforcement possible
Rather than fighting this reality, keyed accepts it. The goal is catching problems when you can still fix them—at import, before joins, during validation—not preventing problems that are already inevitable.
Boundary Checks
Checks run at meaningful moments, not continuously:
df <- data.frame(id = 1:3, value = c("a", "b", "c"))
# Check happens HERE - at key definition
df <- key(df, id)
# No check here - just a filter
df_filtered <- df |> filter(id > 1)
# No check here - just adding a column
df_enriched <- df |> mutate(upper = toupper(value))
# Check happens HERE - at explicit assertion
df |> assume_no_na(value)This keeps the package lightweight. You opt into validation where it matters:
| Boundary | Example |
|---|---|
| Key definition |
key() validates uniqueness |
| Explicit assertions |
assume_unique(), assume_no_na()
|
| Before joins | diagnose_join() |
| Drift checks |
commit_keyed() → check_drift()
|
Graceful Degradation
When operations break key assumptions, keyed warns rather than errors:
df <- data.frame(id = 1:3, x = c("a", "b", "c")) |>
key(id)
# This would create duplicate ids
# Key is dropped with warning, not error
df |> mutate(id = 1)
#> Warning: Key modified and is no longer unique.
#> # A tibble: 3 × 2
#> id x
#> <dbl> <chr>
#> 1 1 a
#> 2 1 b
#> 3 1 cWhy warn instead of error?
Legitimate transformations break keys — Aggregation, cross-joins, reshaping
Debugging is easier — You see the result + warning, not just an error
Pipelines don’t halt unexpectedly — You control when to enforce strictly
For strict enforcement, use assume_*() functions which
do error:
# This WILL error
df |>
mutate(id = 1) |>
assume_unique(id)
#> Warning: Key modified and is no longer unique.
#> Warning: Uniqueness assumption violated.
#> ℹ 2 duplicate value(s) in: id
#> ℹ Rows: 3, Unique: 1What keyed Doesn’t Do
These are deliberate non-goals:
| Feature | Why Not |
|---|---|
| Transactions | Requires infrastructure flat-file workflows don’t have |
| Version history | Use Git for that |
| Foreign key enforcement | Can’t enforce across independent files |
| Cascading updates | No persistent state between sessions |
| Type validation | Use vctrs or typed data frames |
Each would require infrastructure that contradicts the flat-file context. keyed stays minimal by design.
Summary
keyed helps you:
Define keys explicitly —
key(df, col1, col2)Check assumptions at boundaries —
assume_unique(),assume_no_na()Diagnose joins before problems occur —
diagnose_join()Track row identity —
add_id(),compare_ids()Detect drift between versions —
commit_keyed(),check_drift()
The package warns when assumptions break. It doesn’t enforce correctness absolutely. This constraint is intentional—it keeps keyed appropriate for the messy, schema-free world where most data analysis actually happens.